ID: 301

Type: clique

Members: 198 genomes

Member Name Member Toid Species
Clostridium difficile QCD-32g58 638341066 Clostridium difficile
Clostridium difficile 630 (epidemic type X) 640069308 Clostridium difficile
Clostridium difficile QCD-76w55 NAP1 641736216 Clostridium difficile
Clostridium difficile QCD-63q42 641736217 Clostridium difficile
Clostridium difficile QCD-37x79 NAP1a/001 641736218 Clostridium difficile
Clostridium difficile QCD-97b34 NAP1b/006 641736219 Clostridium difficile
Clostridium difficile CIP 107932 642791606 Clostridium difficile
Clostridium difficile QCD-23m63 642791631 Clostridium difficile
Clostridium difficile QCD-66c26 645058803 Clostridium difficile
Clostridium difficile CD196 646311914 Clostridium difficile
Clostridium difficile R20291 646311915 Clostridium difficile
Clostridium difficile BI9 647000226 Clostridium difficile
Clostridium difficile NAP07 647000227 Clostridium difficile
Clostridium difficile NAP08 647000228 Clostridium difficile
Clostridium difficile VPI 10463 ATCC 43255 2512047057 Clostridium difficile
Clostridium difficile ATCC 9689T 2515154168 Clostridium difficile
Clostridium difficile DSM 1296T 2526164710 Clostridium difficile
Clostridium difficile 002-P50-2011 2534681960 Clostridium difficile
Clostridium difficile 050-P50-2011 2534681961 Clostridium difficile
Clostridium difficile 70-100-2010 2537561695 Clostridium difficile
Clostridium difficile CD3 2541047254 Clostridium difficile
Clostridium difficile CD8 2541047255 Clostridium sp.
Clostridium difficile CD9 2541047256 Clostridium sp.
Clostridium difficile CD18 2541047257 Clostridium sp.
Clostridium difficile CD21 2541047258 Clostridium difficile
Clostridium difficile CD17 2541047259 Clostridium sp.
Clostridium difficile CD13 2541047260 Clostridium sp.
Clostridium difficile CD22 2541047261 Clostridium difficile
Clostridium difficile CD39 2541047262 Clostridium difficile
Clostridium difficile CD40 2541047263 Clostridium sp.
Clostridium difficile CD38 2541047264 Clostridium difficile
Clostridium difficile CD34 2541047265 Clostridium sp.
Clostridium difficile CD44 2541047266 Clostridium difficile
Clostridium difficile CD42 2541047267 Clostridium difficile
Clostridium difficile CD41 2541047268 Clostridium difficile
Clostridium difficile CD43 2541047269 Clostridium sp.
Clostridium difficile CD49 2541047270 Clostridium sp.
Clostridium difficile CD47 2541047271 Clostridium sp.
Clostridium difficile CD46 2541047272 Clostridium sp.
Clostridium difficile CD45 2541047273 Clostridium sp.
Clostridium difficile CD51 2541047274 Clostridium sp.
Clostridium difficile CD88 2541047275 Clostridium difficile
Clostridium difficile CD86 2541047276 Clostridium difficile
Clostridium difficile CD69 2541047277 Clostridium difficile
Clostridium difficile CD70 2541047278 Clostridium sp.
Clostridium difficile CD68 2541047279 Clostridium difficile
Clostridium difficile CD92 2541047280 Clostridium difficile
Clostridium difficile CD104 2541047281 Clostridium sp.
Clostridium difficile CD109 2541047282 Clostridium sp.
Clostridium difficile CD90 2541047283 Clostridium sp.
Clostridium difficile CD111 2541047284 Clostridium sp.
Clostridium difficile CD113 2541047285 Clostridium difficile
Clostridium difficile CD129 2541047286 Clostridium sp.
Clostridium difficile CD127 2541047287 Clostridium difficile
Clostridium difficile CD131 2541047288 Clostridium sp.
Clostridium difficile CD159 2541047289 Clostridium sp.
Clostridium difficile CD132 2541047290 Clostridium difficile
Clostridium difficile CD149 2541047291 Clostridium sp.
Clostridium difficile CD144 2541047292 Clostridium sp.
Clostridium difficile CD133 2541047293 Clostridium difficile
Clostridium difficile CD165 2541047294 Clostridium difficile
Clostridium difficile CD169 2541047296 Clostridium sp.
Clostridium difficile CD166 2541047297 Clostridium difficile
Clostridium difficile CD170 2541047298 Clostridium difficile
Clostridium difficile CD175 2541047299 Clostridium difficile
Clostridium difficile CD178 2541047300 Clostridium sp.
Clostridium difficile CD181 2541047301 Clostridium sp.
Clostridium difficile CD200 2541047302 Clostridium sp.
Clostridium difficile CD201 2541047303 Clostridium sp.
Clostridium difficile CD206 2541047304 Clostridium difficile
Clostridium difficile CD211 2541047305 Clostridium difficile
Clostridium difficile CD212 2541047306 Clostridium difficile
Clostridium difficile 655 2541047307 Clostridium sp.
Clostridium difficile 824 2541047308 Clostridium difficile
Clostridium difficile 840 2541047309 Clostridium difficile
Clostridium difficile 842 2541047310 Clostridium sp.
Clostridium difficile 6041 2541047311 Clostridium difficile
Clostridium difficile 6042 2541047312 Clostridium difficile
Clostridium difficile 6057 2541047313 Clostridium sp.
Clostridium difficile DA00044 2541047314 Clostridium sp.
Clostridium difficile DA00062 2541047315 Clostridium difficile
Clostridium difficile DA00065 2541047316 Clostridium difficile
Clostridium difficile DA00114 2541047317 Clostridium sp.
Clostridium difficile DA00126 2541047318 Clostridium sp.
Clostridium difficile DA00128 2541047319 Clostridium sp.
Clostridium difficile DA00129 2541047320 Clostridium sp.
Clostridium difficile DA00141 2541047321 Clostridium sp.
Clostridium difficile DA00131 2541047322 Clostridium sp.
Clostridium difficile DA00132 2541047323 Clostridium difficile
Clostridium difficile DA00134 2541047324 Clostridium difficile
Clostridium difficile DA00142 2541047325 Clostridium sp.
Clostridium difficile DA00145 2541047326 Clostridium difficile
Clostridium difficile DA00149 2541047327 Clostridium sp.
Clostridium difficile DA00154 2541047328 Clostridium difficile
Clostridium difficile DA00160 2541047329 Clostridium sp.
Clostridium difficile DA00167 2541047330 Clostridium sp.
Clostridium difficile DA00165 2541047331 Clostridium difficile
Clostridium difficile DA00174 2541047332 Clostridium sp.
Clostridium difficile DA00189 2541047333 Clostridium sp.
Clostridium difficile DA00183 2541047334 Clostridium difficile
Clostridium difficile DA00191 2541047335 Clostridium sp.
Clostridium difficile DA00193 2541047336 Clostridium difficile
Clostridium difficile DA00196 2541047337 Clostridium sp.
Clostridium difficile DA00195 2541047338 Clostridium difficile
Clostridium difficile DA00197 2541047339 Clostridium sp.
Clostridium difficile DA00211 2541047340 Clostridium difficile
Clostridium difficile DA00203 2541047341 Clostridium sp.
Clostridium difficile DA00210 2541047342 Clostridium difficile
Clostridium difficile DA00212 2541047343 Clostridium difficile
Clostridium difficile DA00244 2541047344 Clostridium sp.
Clostridium difficile DA00238 2541047345 Clostridium difficile
Clostridium difficile DA00232 2541047346 Clostridium sp.
Clostridium difficile DA00216 2541047347 Clostridium sp.
Clostridium difficile DA00215 2541047348 Clostridium sp.
Clostridium difficile DA00245 2541047349 Clostridium sp.
Clostridium difficile DA00246 2541047350 Clostridium difficile
Clostridium difficile DA00305 2541047351 Clostridium difficile
Clostridium difficile DA00275 2541047352 Clostridium sp.
Clostridium difficile DA00261 2541047353 Clostridium difficile
Clostridium difficile DA00273 2541047354 Clostridium sp.
Clostridium difficile DA00256 2541047355 Clostridium difficile
Clostridium difficile DA00313 2541047356 Clostridium sp.
Clostridium difficile F152 2541047357 Clostridium difficile
Clostridium difficile DA00310 2541047358 Clostridium sp.
Clostridium difficile DA00307 2541047359 Clostridium difficile
Clostridium difficile DA00306 2541047360 Clostridium sp.
Clostridium difficile F253 2541047361 Clostridium sp.
Clostridium difficile F249 2541047362 Clostridium sp.
Clostridium difficile F314 2541047363 Clostridium difficile
Clostridium difficile Y10 2541047365 Clostridium sp.
Clostridium difficile Y21 2541047366 Clostridium difficile
Clostridium difficile Y171 2541047367 Clostridium difficile
Clostridium difficile Y155 2541047368 Clostridium difficile
Clostridium difficile Y41 2541047369 Clostridium sp.
Clostridium difficile Y165 2541047370 Clostridium difficile
Clostridium difficile Y202 2541047371 Clostridium difficile
Clostridium difficile Y215 2541047373 Clostridium sp.
Clostridium difficile Y231 2541047374 Clostridium sp.
Clostridium difficile Y312 2541047375 Clostridium sp.
Clostridium difficile Y270 2541047376 Clostridium difficile
Clostridium difficile Y307 2541047377 Clostridium sp.
Clostridium difficile Y247 2541047378 Clostridium sp.
Clostridium difficile Y266 2541047379 Clostridium difficile
Clostridium difficile Y343 2541047380 Clostridium difficile
Clostridium difficile Y358 2541047381 Clostridium difficile
Clostridium difficile Y381 2541047382 Clostridium sp.
Clostridium difficile Y401 2541047384 Clostridium sp.
Clostridium difficile P3 2541047385 Clostridium difficile
Clostridium difficile P5 2541047386 Clostridium sp.
Clostridium difficile P6 2541047387 Clostridium difficile
Clostridium difficile P7 2541047388 Clostridium sp.
Clostridium difficile P9 2541047389 Clostridium difficile
Clostridium difficile P13 2541047390 Clostridium difficile
Clostridium difficile P15 2541047391 Clostridium difficile
Clostridium difficile P19 2541047392 Clostridium sp.
Clostridium difficile P21 2541047393 Clostridium sp.
Clostridium difficile P23 2541047394 Clostridium difficile
Clostridium difficile P24 2541047395 Clostridium difficile
Clostridium difficile P25 2541047396 Clostridium sp.
Clostridium difficile P20 2541047397 Clostridium sp.
Clostridium difficile P32 2541047398 Clostridium difficile
Clostridium difficile P29 2541047399 Clostridium difficile
Clostridium difficile P30 2541047400 Clostridium sp.
Clostridium difficile P31 2541047401 Clostridium difficile
Clostridium difficile P38 2541047403 Clostridium difficile
Clostridium difficile P36 2541047404 Clostridium difficile
Clostridium difficile P42 2541047405 Clostridium sp.
Clostridium difficile P45 2541047406 Clostridium sp.
Clostridium difficile P46 2541047407 Clostridium difficile
Clostridium difficile P50 2541047408 Clostridium difficile
Clostridium difficile P49 2541047409 Clostridium sp.
Clostridium difficile P48 2541047410 Clostridium difficile
Clostridium difficile P51 2541047411 Clostridium difficile
Clostridium difficile P78 2541047412 Clostridium difficile
Clostridium difficile P59 2541047413 Clostridium sp.
Clostridium difficile P61 2541047414 Clostridium difficile
Clostridium difficile P72 2541047415 Clostridium sp.
Clostridium difficile P70 2541047416 Clostridium sp.
Clostridium difficile P69 2541047417 Clostridium sp.
Clostridium difficile P71 2541047418 Clostridium difficile
Clostridium difficile P74 2541047419 Clostridium sp.
Clostridium difficile P75 2541047420 Clostridium sp.
Clostridium difficile P77 2541047421 Clostridium difficile
Clostridium difficile CD196 2541047488 Clostridium sp.
Clostridium difficile 342 2541047489 Clostridium difficile
Clostridium difficile P1 2541047490 Clostridium difficile
Clostridium difficile P2 2541047494 Clostridium difficile
Clostridium difficile P73 2541047495 Clostridium difficile
Clostridium difficile P11 2541047496 Clostridium sp.
Clostridium difficile P8 2541047497 Clostridium difficile
Clostridium difficile F601 2541047510 Clostridium difficile
Clostridium difficile F548 2541047511 Clostridium sp.
Clostridium difficile F525 2541047512 Clostridium difficile
Clostridium difficile F480 2541047513 Clostridium difficile
Clostridium difficile F200 2541047514 Clostridium sp.
Clostridium difficile 6503 2547132210 Clostridium difficile
Clostridium difficile 6466 2547132211 Clostridium difficile
Clostridium difficile CD37 2548876768 Clostridium difficile

Intra-clique gANI: 99.28

Intra-clique AF: 0.89

Has an inter-clique gANI >=90 with clusters:

Cluster Id Cluster type Inter ANI Inter AF
940 clique 93.57 0
1209 singleton 95.6188888888889 0
1531 singleton 98.48 0
2112 singleton 97.9027272727273 0
2353 singleton 92.179595959596 0.741010101010102
3529 singleton 91.1234831460675 0
4914 singleton 99.420505050505 0.262373737373738

Contact Us
Credits
Disclaimer
Accessibility / Section 508 Statement
Version 0.3 : April 2014
©1997-2015 The Regents of the University of California